GSE230372 KDM4A knockdown CAL-27 LEF1 1 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE230372_KDM4A knockdown_CAL-27_LEF1_1_v_2_human_dn.

Results found

Linked to

	Label	Description
	OLMALINC Gene (Entity type)	oligodendrocyte maturation-associated long intergenic non-coding RNA
	DUBR Gene (Entity type)	DPPA2 upstream binding RNA
	SMIM44 Gene (Entity type)	small integral membrane protein 44
	UCA1 Gene (Entity type)	urothelial cancer associated 1
	PRR34-AS1 Gene (Entity type)	PRR34 antisense RNA 1
	THUMPD3-AS1 Gene (Entity type)	THUMPD3 antisense RNA 1
	AFG3L1P Gene (Entity type)	AFG3 like matrix AAA peptidase subunit 1, pseudogene
	FAM157A Gene (Entity type)	family with sequence similarity 157 member A
	ENTPD1-AS1 Gene (Entity type)	ENTPD1 antisense RNA 1
	LINC01287 Gene (Entity type)	long intergenic non-protein coding RNA 1287

OLMALINC

Gene (Entity type)

oligodendrocyte maturation-associated long intergenic non-coding RNA

DUBR

Gene (Entity type)

DPPA2 upstream binding RNA

SMIM44

Gene (Entity type)

small integral membrane protein 44

UCA1

Gene (Entity type)

urothelial cancer associated 1

PRR34-AS1

Gene (Entity type)

PRR34 antisense RNA 1

THUMPD3-AS1

Gene (Entity type)

THUMPD3 antisense RNA 1

AFG3L1P

Gene (Entity type)

AFG3 like matrix AAA peptidase subunit 1, pseudogene

FAM157A

Gene (Entity type)

family with sequence similarity 157 member A

ENTPD1-AS1

Gene (Entity type)

ENTPD1 antisense RNA 1

LINC01287

Gene (Entity type)

long intergenic non-protein coding RNA 1287

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.