GSE159678 hydroxychloroquine 4 v 7 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE159678_hydroxychloroquine_4_v_7_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE159678_hydroxychloroquine_4_v_7_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE159678_hydroxychloroquine_4_v_7_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE159678_hydroxychloroquine_4_v_7_human_up.

Results found

Linked to

	Label	Description
	LINC02910 Gene (Entity type)	long intergenic non-protein coding RNA 2910
	SSPOP Gene (Entity type)	SCO-spondin, pseudogene
	ITGB2-AS1 Gene (Entity type)	ITGB2 antisense RNA 1
	MBNL1-AS1 Gene (Entity type)	MBNL1 antisense RNA 1
	ARHGAP27P1-BPTFP1-KPNA2P3 Gene (Entity type)	ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene
	NUDT16L2P Gene (Entity type)	nudix hydrolase 16 like 2, pseudogene
	FAM157A Gene (Entity type)	family with sequence similarity 157 member A
	SENCR Gene (Entity type)	smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA
	NAPSB Gene (Entity type)	napsin B aspartic peptidase (pseudogene)
	MIR223HG Gene (Entity type)	MIR223 host gene

LINC02910

Gene (Entity type)

long intergenic non-protein coding RNA 2910

SSPOP

Gene (Entity type)

SCO-spondin, pseudogene

ITGB2-AS1

Gene (Entity type)

ITGB2 antisense RNA 1

MBNL1-AS1

Gene (Entity type)

MBNL1 antisense RNA 1

ARHGAP27P1-BPTFP1-KPNA2P3

Gene (Entity type)

ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene

NUDT16L2P

Gene (Entity type)

nudix hydrolase 16 like 2, pseudogene

FAM157A

Gene (Entity type)

family with sequence similarity 157 member A

SENCR

Gene (Entity type)

smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA

NAPSB

Gene (Entity type)

napsin B aspartic peptidase (pseudogene)

MIR223HG

Gene (Entity type)

MIR223 host gene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.