GSE261563 CX-5461 7 v 4 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE261563_CX-5461_7_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE261563_CX-5461_7_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE261563_CX-5461_7_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE261563_CX-5461_7_v_4_human_up.

Results found

Linked to

	Label	Description
	POU3F3 Gene (Entity type)	ENSG00000269707 - POU class 3 homeobox 3
	FGD5-AS1 Gene (Entity type)	ENSG00000225733 - FGD5 antisense RNA 1
	TPTEP1 Gene (Entity type)	ENSG00000290418 - TPTE pseudogene 1
	HHIP-AS1 Gene (Entity type)	ENSG00000248890 - HHIP antisense RNA 1
	SOX2-OT Gene (Entity type)	ENSG00000242808 - SOX2 overlapping transcript
	COCH-AS1 Gene (Entity type)	ENSG00000258525 - COCH antisense RNA 1
	LINC02587 Gene (Entity type)	ENSG00000229108 - long intergenic non-protein coding RNA 2587
	PMCHL2 Gene (Entity type)	ENSG00000290836 - pro-melanin concentrating hormone like 2 (pseudogene)
	TTC9-DT Gene (Entity type)	ENSG00000245466 - TTC9 divergent transcript
	LOC107984784 Gene (Entity type)	ENSG00000259697 - uncharacterized LOC107984784

POU3F3

Gene (Entity type)

ENSG00000269707 - POU class 3 homeobox 3

FGD5-AS1

Gene (Entity type)

ENSG00000225733 - FGD5 antisense RNA 1

TPTEP1

Gene (Entity type)

ENSG00000290418 - TPTE pseudogene 1

HHIP-AS1

Gene (Entity type)

ENSG00000248890 - HHIP antisense RNA 1

SOX2-OT

Gene (Entity type)

ENSG00000242808 - SOX2 overlapping transcript

COCH-AS1

Gene (Entity type)

ENSG00000258525 - COCH antisense RNA 1

LINC02587

Gene (Entity type)

ENSG00000229108 - long intergenic non-protein coding RNA 2587

PMCHL2

Gene (Entity type)

ENSG00000290836 - pro-melanin concentrating hormone like 2 (pseudogene)

TTC9-DT

Gene (Entity type)

ENSG00000245466 - TTC9 divergent transcript

LOC107984784

Gene (Entity type)

ENSG00000259697 - uncharacterized LOC107984784

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.