NREP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NREP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NREP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NREP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NREP Up.

Results found

Linked to

	Label	Description
	CMPK1 Gene (Entity type)	ENSG00000162368 - cytidine/uridine monophosphate kinase 1
	GOLPH3L Gene (Entity type)	ENSG00000143457 - golgi phosphoprotein 3 like
	GABARAPL2 Gene (Entity type)	ENSG00000034713 - GABA type A receptor associated protein like 2
	RPA2 Gene (Entity type)	ENSG00000117748 - replication protein A2
	CRNN Gene (Entity type)	ENSG00000143536 - cornulin
	ZDHHC4 Gene (Entity type)	ENSG00000136247 - zDHHC palmitoyltransferase 4
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	DMTN Gene (Entity type)	ENSG00000158856 - dematin actin binding protein
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated
	ERH Gene (Entity type)	ENSG00000100632 - ERH mRNA splicing and mitosis factor

CMPK1

Gene (Entity type)

ENSG00000162368 - cytidine/uridine monophosphate kinase 1

GOLPH3L

Gene (Entity type)

ENSG00000143457 - golgi phosphoprotein 3 like

GABARAPL2

Gene (Entity type)

ENSG00000034713 - GABA type A receptor associated protein like 2

RPA2

Gene (Entity type)

ENSG00000117748 - replication protein A2

CRNN

Gene (Entity type)

ENSG00000143536 - cornulin

ZDHHC4

Gene (Entity type)

ENSG00000136247 - zDHHC palmitoyltransferase 4

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

DMTN

Gene (Entity type)

ENSG00000158856 - dematin actin binding protein

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

ERH

Gene (Entity type)

ENSG00000100632 - ERH mRNA splicing and mitosis factor

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.