NME3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NME3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NME3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NME3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NME3 Down.

Results found

Linked to

	Label	Description
	ZC3H13 Gene (Entity type)	ENSG00000123200 - zinc finger CCCH-type containing 13
	ARPP21 Gene (Entity type)	ENSG00000172995 - cAMP regulated phosphoprotein 21
	OLFML1 Gene (Entity type)	ENSG00000183801 - olfactomedin like 1
	BSCL2 Gene (Entity type)	ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin
	COX4I1 Gene (Entity type)	ENSG00000131143 - cytochrome c oxidase subunit 4I1
	NUDC Gene (Entity type)	ENSG00000090273 - nuclear distribution C, dynein complex regulator
	PLEKHS1 Gene (Entity type)	ENSG00000148735 - pleckstrin homology domain containing S1
	IER3IP1 Gene (Entity type)	ENSG00000134049 - immediate early response 3 interacting protein 1
	PSPC1 Gene (Entity type)	ENSG00000121390 - paraspeckle component 1
	PAPPA Gene (Entity type)	ENSG00000182752 - pappalysin 1

ZC3H13

Gene (Entity type)

ENSG00000123200 - zinc finger CCCH-type containing 13

ARPP21

Gene (Entity type)

ENSG00000172995 - cAMP regulated phosphoprotein 21

OLFML1

Gene (Entity type)

ENSG00000183801 - olfactomedin like 1

BSCL2

Gene (Entity type)

ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin

COX4I1

Gene (Entity type)

ENSG00000131143 - cytochrome c oxidase subunit 4I1

NUDC

Gene (Entity type)

ENSG00000090273 - nuclear distribution C, dynein complex regulator

PLEKHS1

Gene (Entity type)

ENSG00000148735 - pleckstrin homology domain containing S1

IER3IP1

Gene (Entity type)

ENSG00000134049 - immediate early response 3 interacting protein 1

PSPC1

Gene (Entity type)

ENSG00000121390 - paraspeckle component 1

PAPPA

Gene (Entity type)

ENSG00000182752 - pappalysin 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.