RNPEP Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RNPEP Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RNPEP Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RNPEP Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RNPEP Down.

Results found

Linked to

	Label	Description
	SIGLEC1 Gene (Entity type)	ENSG00000088827 - sialic acid binding Ig like lectin 1
	SGSM2 Gene (Entity type)	ENSG00000141258 - small G protein signaling modulator 2
	SCGN Gene (Entity type)	ENSG00000079689 - secretagogin, EF-hand calcium binding protein
	RAMP3 Gene (Entity type)	ENSG00000122679 - receptor activity modifying protein 3
	CERS4 Gene (Entity type)	ENSG00000090661 - ceramide synthase 4
	GTF2B Gene (Entity type)	ENSG00000137947 - general transcription factor IIB
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	OMD Gene (Entity type)	ENSG00000127083 - osteomodulin
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	APOA4 Gene (Entity type)	ENSG00000110244 - apolipoprotein A4

SIGLEC1

Gene (Entity type)

ENSG00000088827 - sialic acid binding Ig like lectin 1

SGSM2

Gene (Entity type)

ENSG00000141258 - small G protein signaling modulator 2

SCGN

Gene (Entity type)

ENSG00000079689 - secretagogin, EF-hand calcium binding protein

RAMP3

Gene (Entity type)

ENSG00000122679 - receptor activity modifying protein 3

CERS4

Gene (Entity type)

ENSG00000090661 - ceramide synthase 4

GTF2B

Gene (Entity type)

ENSG00000137947 - general transcription factor IIB

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

OMD

Gene (Entity type)

ENSG00000127083 - osteomodulin

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

APOA4

Gene (Entity type)

ENSG00000110244 - apolipoprotein A4

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.