VRK3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with VRK3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with VRK3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with VRK3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with VRK3 Up.

Results found

Linked to

	Label	Description
	CRNN Gene (Entity type)	ENSG00000143536 - cornulin
	GSTT2 Gene (Entity type)	ENSG00000099984 - glutathione S-transferase theta 2 (gene/pseudogene)
	DNAJA2 Gene (Entity type)	ENSG00000069345 - DnaJ heat shock protein family (Hsp40) member A2
	BATF3 Gene (Entity type)	ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3
	KLHL2 Gene (Entity type)	ENSG00000109466 - kelch like family member 2
	PRDX6 Gene (Entity type)	ENSG00000117592 - peroxiredoxin 6
	ALPL Gene (Entity type)	ENSG00000162551 - alkaline phosphatase, biomineralization associated
	ADAP1 Gene (Entity type)	ENSG00000105963 - ArfGAP with dual PH domains 1
	TTC9 Gene (Entity type)	ENSG00000133985 - tetratricopeptide repeat domain 9
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1

CRNN

Gene (Entity type)

ENSG00000143536 - cornulin

GSTT2

Gene (Entity type)

ENSG00000099984 - glutathione S-transferase theta 2 (gene/pseudogene)

DNAJA2

Gene (Entity type)

ENSG00000069345 - DnaJ heat shock protein family (Hsp40) member A2

BATF3

Gene (Entity type)

ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3

KLHL2

Gene (Entity type)

ENSG00000109466 - kelch like family member 2

PRDX6

Gene (Entity type)

ENSG00000117592 - peroxiredoxin 6

ALPL

Gene (Entity type)

ENSG00000162551 - alkaline phosphatase, biomineralization associated

ADAP1

Gene (Entity type)

ENSG00000105963 - ArfGAP with dual PH domains 1

TTC9

Gene (Entity type)

ENSG00000133985 - tetratricopeptide repeat domain 9

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.