CTSF Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CTSF Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CTSF Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CTSF Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CTSF Up.

Results found

Linked to

	Label	Description
	CORO1B Gene (Entity type)	ENSG00000172725 - coronin 1B
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	VPS13B Gene (Entity type)	ENSG00000132549 - vacuolar protein sorting 13 homolog B
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	UPF3B Gene (Entity type)	ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay
	SLC15A3 Gene (Entity type)	ENSG00000110446 - solute carrier family 15 member 3
	RUNX1T1 Gene (Entity type)	ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1
	STX4 Gene (Entity type)	ENSG00000103496 - syntaxin 4
	PRRC2C Gene (Entity type)	ENSG00000117523 - proline rich coiled-coil 2C
	CST2 Gene (Entity type)	ENSG00000170369 - cystatin SA

CORO1B

Gene (Entity type)

ENSG00000172725 - coronin 1B

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

VPS13B

Gene (Entity type)

ENSG00000132549 - vacuolar protein sorting 13 homolog B

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

UPF3B

Gene (Entity type)

ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay

SLC15A3

Gene (Entity type)

ENSG00000110446 - solute carrier family 15 member 3

RUNX1T1

Gene (Entity type)

ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1

STX4

Gene (Entity type)

ENSG00000103496 - syntaxin 4

PRRC2C

Gene (Entity type)

ENSG00000117523 - proline rich coiled-coil 2C

CST2

Gene (Entity type)

ENSG00000170369 - cystatin SA

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.