GSE138937 Rad21 CTCF knockdown SLK 2 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE138937_Rad21_CTCF knockdown_SLK_2_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE138937_Rad21_CTCF knockdown_SLK_2_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE138937_Rad21_CTCF knockdown_SLK_2_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE138937_Rad21_CTCF knockdown_SLK_2_v_0_human_up.

Results found

Linked to

	Label	Description
	PGRMC1 Gene (Entity type)	ENSG00000101856 - progesterone receptor membrane component 1
	PIK3CB Gene (Entity type)	ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
	BRAF Gene (Entity type)	ENSG00000157764 - B-Raf proto-oncogene, serine/threonine kinase
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	CSNK2A2 Gene (Entity type)	ENSG00000070770 - casein kinase 2 alpha 2
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	NRAS Gene (Entity type)	ENSG00000213281 - NRAS proto-oncogene, GTPase
	EXT2 Gene (Entity type)	ENSG00000151348 - exostosin glycosyltransferase 2
	PLCG1 Gene (Entity type)	ENSG00000124181 - phospholipase C gamma 1
	MAPK9 Gene (Entity type)	ENSG00000050748 - mitogen-activated protein kinase 9

PGRMC1

Gene (Entity type)

ENSG00000101856 - progesterone receptor membrane component 1

PIK3CB

Gene (Entity type)

ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta

BRAF

Gene (Entity type)

ENSG00000157764 - B-Raf proto-oncogene, serine/threonine kinase

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

CSNK2A2

Gene (Entity type)

ENSG00000070770 - casein kinase 2 alpha 2

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

NRAS

Gene (Entity type)

ENSG00000213281 - NRAS proto-oncogene, GTPase

EXT2

Gene (Entity type)

ENSG00000151348 - exostosin glycosyltransferase 2

PLCG1

Gene (Entity type)

ENSG00000124181 - phospholipase C gamma 1

MAPK9

Gene (Entity type)

ENSG00000050748 - mitogen-activated protein kinase 9

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.