MAGI2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MAGI2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MAGI2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MAGI2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MAGI2 Up.

Results found

Linked to

	Label	Description
	NFYA Gene (Entity type)	ENSG00000001167 - nuclear transcription factor Y subunit alpha
	XRCC4 Gene (Entity type)	ENSG00000152422 - X-ray repair cross complementing 4
	ADPRM Gene (Entity type)	ENSG00000170222 - ADP-ribose/CDP-alcohol diphosphatase, manganese dependent
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	EMC2 Gene (Entity type)	ENSG00000104412 - ER membrane protein complex subunit 2
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	RNF14 Gene (Entity type)	ENSG00000013561 - ring finger protein 14
	NOP10 Gene (Entity type)	ENSG00000182117 - NOP10 ribonucleoprotein
	MDH1 Gene (Entity type)	ENSG00000014641 - malate dehydrogenase 1
	LYRM2 Gene (Entity type)	ENSG00000083099 - LYR motif containing 2

NFYA

Gene (Entity type)

ENSG00000001167 - nuclear transcription factor Y subunit alpha

XRCC4

Gene (Entity type)

ENSG00000152422 - X-ray repair cross complementing 4

ADPRM

Gene (Entity type)

ENSG00000170222 - ADP-ribose/CDP-alcohol diphosphatase, manganese dependent

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

EMC2

Gene (Entity type)

ENSG00000104412 - ER membrane protein complex subunit 2

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

RNF14

Gene (Entity type)

ENSG00000013561 - ring finger protein 14

NOP10

Gene (Entity type)

ENSG00000182117 - NOP10 ribonucleoprotein

MDH1

Gene (Entity type)

ENSG00000014641 - malate dehydrogenase 1

LYRM2

Gene (Entity type)

ENSG00000083099 - LYR motif containing 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.