GSE228619 cadherin-11 CDH11 knockdown RNA Small Interfering 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_up.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	OXSR1 Gene (Entity type)	ENSG00000172939 - oxidative stress responsive kinase 1
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	IL11 Gene (Entity type)	ENSG00000095752 - interleukin 11
	POLR3K Gene (Entity type)	ENSG00000161980 - RNA polymerase III subunit K
	DTX3L Gene (Entity type)	ENSG00000163840 - deltex E3 ubiquitin ligase 3L
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

OXSR1

Gene (Entity type)

ENSG00000172939 - oxidative stress responsive kinase 1

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

IL11

Gene (Entity type)

ENSG00000095752 - interleukin 11

POLR3K

Gene (Entity type)

ENSG00000161980 - RNA polymerase III subunit K

DTX3L

Gene (Entity type)

ENSG00000163840 - deltex E3 ubiquitin ligase 3L

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.