NME4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NME4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NME4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NME4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NME4 Up.

Results found

Linked to

	Label	Description
	GPRASP1 Gene (Entity type)	ENSG00000198932 - G protein-coupled receptor associated sorting protein 1
	CPB2 Gene (Entity type)	ENSG00000080618 - carboxypeptidase B2
	MAGI2 Gene (Entity type)	ENSG00000187391 - membrane associated guanylate kinase, WW and PDZ domain containing 2
	SOX13 Gene (Entity type)	ENSG00000143842 - SRY-box transcription factor 13
	SLC22A3 Gene (Entity type)	ENSG00000146477 - solute carrier family 22 member 3
	SS18L1 Gene (Entity type)	ENSG00000184402 - SS18L1 subunit of BAF chromatin remodeling complex
	KCNMB1 Gene (Entity type)	ENSG00000145936 - potassium calcium-activated channel subfamily M regulatory beta subunit 1
	NUP133 Gene (Entity type)	ENSG00000069248 - nucleoporin 133
	ZFR Gene (Entity type)	ENSG00000056097 - zinc finger RNA binding protein

GPRASP1

Gene (Entity type)

ENSG00000198932 - G protein-coupled receptor associated sorting protein 1

CPB2

Gene (Entity type)

ENSG00000080618 - carboxypeptidase B2

MAGI2

Gene (Entity type)

ENSG00000187391 - membrane associated guanylate kinase, WW and PDZ domain containing 2

SOX13

Gene (Entity type)

ENSG00000143842 - SRY-box transcription factor 13

SLC22A3

Gene (Entity type)

ENSG00000146477 - solute carrier family 22 member 3

SS18L1

Gene (Entity type)

ENSG00000184402 - SS18L1 subunit of BAF chromatin remodeling complex

KCNMB1

Gene (Entity type)

ENSG00000145936 - potassium calcium-activated channel subfamily M regulatory beta subunit 1

NUP133

Gene (Entity type)

ENSG00000069248 - nucleoporin 133

ZFR

Gene (Entity type)

ENSG00000056097 - zinc finger RNA binding protein

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.