UMOD Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with UMOD Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with UMOD Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with UMOD Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with UMOD Up.

Results found

Linked to

	Label	Description
	CA3 Gene (Entity type)	ENSG00000164879 - carbonic anhydrase 3
	CALB2 Gene (Entity type)	ENSG00000172137 - calbindin 2
	FAM169A Gene (Entity type)	ENSG00000198780 - family with sequence similarity 169 member A
	RAB23 Gene (Entity type)	ENSG00000112210 - RAB23, member RAS oncogene family
	JAK2 Gene (Entity type)	ENSG00000096968 - Janus kinase 2
	POLR2K Gene (Entity type)	ENSG00000147669 - RNA polymerase II, I and III subunit K
	NOC3L Gene (Entity type)	ENSG00000173145 - NOC3 like DNA replication regulator
	CYP39A1 Gene (Entity type)	ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1
	NLGN1 Gene (Entity type)	ENSG00000169760 - neuroligin 1
	CHMP2B Gene (Entity type)	ENSG00000083937 - charged multivesicular body protein 2B

CA3

Gene (Entity type)

ENSG00000164879 - carbonic anhydrase 3

CALB2

Gene (Entity type)

ENSG00000172137 - calbindin 2

FAM169A

Gene (Entity type)

ENSG00000198780 - family with sequence similarity 169 member A

RAB23

Gene (Entity type)

ENSG00000112210 - RAB23, member RAS oncogene family

JAK2

Gene (Entity type)

ENSG00000096968 - Janus kinase 2

POLR2K

Gene (Entity type)

ENSG00000147669 - RNA polymerase II, I and III subunit K

NOC3L

Gene (Entity type)

ENSG00000173145 - NOC3 like DNA replication regulator

CYP39A1

Gene (Entity type)

ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1

NLGN1

Gene (Entity type)

ENSG00000169760 - neuroligin 1

CHMP2B

Gene (Entity type)

ENSG00000083937 - charged multivesicular body protein 2B

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.