TRRAP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TRRAP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TRRAP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TRRAP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TRRAP Up.

Results found

Linked to

	Label	Description
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	LRPAP1 Gene (Entity type)	ENSG00000163956 - LDL receptor related protein associated protein 1
	AGA Gene (Entity type)	ENSG00000038002 - aspartylglucosaminidase
	WWOX Gene (Entity type)	ENSG00000186153 - WW domain containing oxidoreductase
	SMPD1 Gene (Entity type)	ENSG00000166311 - sphingomyelin phosphodiesterase 1
	COX17 Gene (Entity type)	ENSG00000138495 - cytochrome c oxidase copper chaperone COX17
	NSL1 Gene (Entity type)	ENSG00000117697 - NSL1 component of MIS12 kinetochore complex
	APPBP2 Gene (Entity type)	ENSG00000062725 - amyloid beta precursor protein binding protein 2
	TP53BP1 Gene (Entity type)	ENSG00000067369 - tumor protein p53 binding protein 1
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

LRPAP1

Gene (Entity type)

ENSG00000163956 - LDL receptor related protein associated protein 1

AGA

Gene (Entity type)

ENSG00000038002 - aspartylglucosaminidase

WWOX

Gene (Entity type)

ENSG00000186153 - WW domain containing oxidoreductase

SMPD1

Gene (Entity type)

ENSG00000166311 - sphingomyelin phosphodiesterase 1

COX17

Gene (Entity type)

ENSG00000138495 - cytochrome c oxidase copper chaperone COX17

NSL1

Gene (Entity type)

ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

APPBP2

Gene (Entity type)

ENSG00000062725 - amyloid beta precursor protein binding protein 2

TP53BP1

Gene (Entity type)

ENSG00000067369 - tumor protein p53 binding protein 1

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.