SCN3A Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SCN3A Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SCN3A Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SCN3A Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SCN3A Down.

Results found

Linked to

	Label	Description
	RPA2 Gene (Entity type)	ENSG00000117748 - replication protein A2
	CNIH3 Gene (Entity type)	ENSG00000143786 - cornichon family AMPA receptor auxiliary protein 3
	DMTN Gene (Entity type)	ENSG00000158856 - dematin actin binding protein
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase
	RNF5 Gene (Entity type)	ENSG00000204308 - ring finger protein 5
	VAMP2 Gene (Entity type)	ENSG00000220205 - vesicle associated membrane protein 2
	GCAT Gene (Entity type)	ENSG00000100116 - glycine C-acetyltransferase
	MEA1 Gene (Entity type)	ENSG00000124733 - male-enhanced antigen 1
	RER1 Gene (Entity type)	ENSG00000157916 - retention in endoplasmic reticulum sorting receptor 1
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3

RPA2

Gene (Entity type)

ENSG00000117748 - replication protein A2

CNIH3

Gene (Entity type)

ENSG00000143786 - cornichon family AMPA receptor auxiliary protein 3

DMTN

Gene (Entity type)

ENSG00000158856 - dematin actin binding protein

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

RNF5

Gene (Entity type)

ENSG00000204308 - ring finger protein 5

VAMP2

Gene (Entity type)

ENSG00000220205 - vesicle associated membrane protein 2

GCAT

Gene (Entity type)

ENSG00000100116 - glycine C-acetyltransferase

MEA1

Gene (Entity type)

ENSG00000124733 - male-enhanced antigen 1

RER1

Gene (Entity type)

ENSG00000157916 - retention in endoplasmic reticulum sorting receptor 1

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.