CD3G Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CD3G Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CD3G Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CD3G Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CD3G Up.

Results found

Linked to

	Label	Description
	CSF2RA Gene (Entity type)	ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha
	ENSA Gene (Entity type)	ENSG00000143420 - endosulfine alpha
	CCDC81 Gene (Entity type)	ENSG00000149201 - coiled-coil domain containing 81
	PIP5K1A Gene (Entity type)	ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
	CFAP298 Gene (Entity type)	ENSG00000159079 - cilia and flagella associated protein 298
	RABEPK Gene (Entity type)	ENSG00000136933 - Rab9 effector protein with kelch motifs
	ERF Gene (Entity type)	ENSG00000105722 - ETS2 repressor factor
	EIF3I Gene (Entity type)	ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I
	PPID Gene (Entity type)	ENSG00000171497 - peptidylprolyl isomerase D
	ISOC2 Gene (Entity type)	ENSG00000063241 - isochorismatase domain containing 2

CSF2RA

Gene (Entity type)

ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha

ENSA

Gene (Entity type)

ENSG00000143420 - endosulfine alpha

CCDC81

Gene (Entity type)

ENSG00000149201 - coiled-coil domain containing 81

PIP5K1A

Gene (Entity type)

ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha

CFAP298

Gene (Entity type)

ENSG00000159079 - cilia and flagella associated protein 298

RABEPK

Gene (Entity type)

ENSG00000136933 - Rab9 effector protein with kelch motifs

ERF

Gene (Entity type)

ENSG00000105722 - ETS2 repressor factor

EIF3I

Gene (Entity type)

ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I

PPID

Gene (Entity type)

ENSG00000171497 - peptidylprolyl isomerase D

ISOC2

Gene (Entity type)

ENSG00000063241 - isochorismatase domain containing 2

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.