GSE207410 GSE207411 ARID1A knockdown 1 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

Results found

Linked to

	Label	Description
	RPS6 Gene (Entity type)	ENSG00000137154 - ribosomal protein S6
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	DFFA Gene (Entity type)	ENSG00000160049 - DNA fragmentation factor subunit alpha
	MLH1 Gene (Entity type)	ENSG00000076242 - mutL homolog 1
	TLE3 Gene (Entity type)	ENSG00000140332 - TLE family member 3, transcriptional corepressor
	UBTF Gene (Entity type)	ENSG00000108312 - upstream binding transcription factor
	NET1 Gene (Entity type)	ENSG00000173848 - neuroepithelial cell transforming 1
	MED28 Gene (Entity type)	ENSG00000118579 - mediator complex subunit 28
	RPL5 Gene (Entity type)	ENSG00000122406 - ribosomal protein L5
	RPL9 Gene (Entity type)	ENSG00000163682 - ribosomal protein L9

RPS6

Gene (Entity type)

ENSG00000137154 - ribosomal protein S6

CAT

Gene (Entity type)

ENSG00000121691 - catalase

DFFA

Gene (Entity type)

ENSG00000160049 - DNA fragmentation factor subunit alpha

MLH1

Gene (Entity type)

ENSG00000076242 - mutL homolog 1

TLE3

Gene (Entity type)

ENSG00000140332 - TLE family member 3, transcriptional corepressor

UBTF

Gene (Entity type)

ENSG00000108312 - upstream binding transcription factor

NET1

Gene (Entity type)

ENSG00000173848 - neuroepithelial cell transforming 1

MED28

Gene (Entity type)

ENSG00000118579 - mediator complex subunit 28

RPL5

Gene (Entity type)

ENSG00000122406 - ribosomal protein L5

RPL9

Gene (Entity type)

ENSG00000163682 - ribosomal protein L9

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.