GSE207410 GSE207411 ARID1A knockdown 1 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE207410_GSE207411_ARID1A knockdown_1_v_4_human_up.

Results found

Linked to

	Label	Description
	RPS18 Gene (Entity type)	ribosomal protein S18
	GAS5 Gene (Entity type)	growth arrest specific 5
	SNHG29 Gene (Entity type)	small nucleolar RNA host gene 29
	SNHG3 Gene (Entity type)	small nucleolar RNA host gene 3
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	H2BC20P Gene (Entity type)	H2B clustered histone 20, pseudogene
	TMEM198B Gene (Entity type)	transmembrane protein 198B (pseudogene)
	CD27-AS1 Gene (Entity type)	CD27 antisense RNA 1
	FIRRE Gene (Entity type)	firre intergenic repeating RNA element
	TMEM147-AS1 Gene (Entity type)	TMEM147 antisense RNA 1

RPS18

Gene (Entity type)

ribosomal protein S18

GAS5

Gene (Entity type)

growth arrest specific 5

SNHG29

Gene (Entity type)

small nucleolar RNA host gene 29

SNHG3

Gene (Entity type)

small nucleolar RNA host gene 3

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

H2BC20P

Gene (Entity type)

H2B clustered histone 20, pseudogene

TMEM198B

Gene (Entity type)

transmembrane protein 198B (pseudogene)

CD27-AS1

Gene (Entity type)

CD27 antisense RNA 1

FIRRE

Gene (Entity type)

firre intergenic repeating RNA element

TMEM147-AS1

Gene (Entity type)

TMEM147 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.