CKB Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CKB Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CKB Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CKB Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CKB Up.

Results found

Linked to

	Label	Description
	EIF4E Gene (Entity type)	ENSG00000151247 - eukaryotic translation initiation factor 4E
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	EMILIN1 Gene (Entity type)	ENSG00000138080 - elastin microfibril interfacer 1
	MDC1 Gene (Entity type)	ENSG00000137337 - mediator of DNA damage checkpoint 1
	PLA2G12A Gene (Entity type)	ENSG00000123739 - phospholipase A2 group XIIA
	IMPACT Gene (Entity type)	ENSG00000154059 - impact RWD domain protein
	BORA Gene (Entity type)	ENSG00000136122 - BORA aurora kinase A activator
	LILRA2 Gene (Entity type)	ENSG00000239998 - leukocyte immunoglobulin like receptor A2
	APIP Gene (Entity type)	ENSG00000149089 - APAF1 interacting protein
	HTATSF1 Gene (Entity type)	ENSG00000102241 - HIV-1 Tat specific factor 1

EIF4E

Gene (Entity type)

ENSG00000151247 - eukaryotic translation initiation factor 4E

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

EMILIN1

Gene (Entity type)

ENSG00000138080 - elastin microfibril interfacer 1

MDC1

Gene (Entity type)

ENSG00000137337 - mediator of DNA damage checkpoint 1

PLA2G12A

Gene (Entity type)

ENSG00000123739 - phospholipase A2 group XIIA

IMPACT

Gene (Entity type)

ENSG00000154059 - impact RWD domain protein

BORA

Gene (Entity type)

ENSG00000136122 - BORA aurora kinase A activator

LILRA2

Gene (Entity type)

ENSG00000239998 - leukocyte immunoglobulin like receptor A2

APIP

Gene (Entity type)

ENSG00000149089 - APAF1 interacting protein

HTATSF1

Gene (Entity type)

ENSG00000102241 - HIV-1 Tat specific factor 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.