SYNM Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SYNM Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SYNM Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SYNM Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SYNM Down.

Results found

Linked to

	Label	Description
	EXOSC9 Gene (Entity type)	ENSG00000123737 - exosome component 9
	IL16 Gene (Entity type)	ENSG00000172349 - interleukin 16
	DEAF1 Gene (Entity type)	ENSG00000177030 - DEAF1 transcription factor
	TAF10 Gene (Entity type)	ENSG00000166337 - TATA-box binding protein associated factor 10
	YPEL1 Gene (Entity type)	ENSG00000100027 - yippee like 1
	AGPAT1 Gene (Entity type)	ENSG00000204310 - 1-acylglycerol-3-phosphate O-acyltransferase 1
	HPF1 Gene (Entity type)	ENSG00000056050 - histone PARylation factor 1
	DCP2 Gene (Entity type)	ENSG00000172795 - decapping mRNA 2
	BIN2 Gene (Entity type)	ENSG00000110934 - bridging integrator 2
	IGFLR1 Gene (Entity type)	ENSG00000126246 - IGF like family receptor 1

EXOSC9

Gene (Entity type)

ENSG00000123737 - exosome component 9

IL16

Gene (Entity type)

ENSG00000172349 - interleukin 16

DEAF1

Gene (Entity type)

ENSG00000177030 - DEAF1 transcription factor

TAF10

Gene (Entity type)

ENSG00000166337 - TATA-box binding protein associated factor 10

YPEL1

Gene (Entity type)

ENSG00000100027 - yippee like 1

AGPAT1

Gene (Entity type)

ENSG00000204310 - 1-acylglycerol-3-phosphate O-acyltransferase 1

HPF1

Gene (Entity type)

ENSG00000056050 - histone PARylation factor 1

DCP2

Gene (Entity type)

ENSG00000172795 - decapping mRNA 2

BIN2

Gene (Entity type)

ENSG00000110934 - bridging integrator 2

IGFLR1

Gene (Entity type)

ENSG00000126246 - IGF like family receptor 1

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.