GSE213588 trametinib NF1 8 v 13 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE213588_trametinib_NF1_8_v_13_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE213588_trametinib_NF1_8_v_13_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE213588_trametinib_NF1_8_v_13_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE213588_trametinib_NF1_8_v_13_human_up.

Results found

Linked to

	Label	Description
	EGF Gene (Entity type)	ENSG00000138798 - epidermal growth factor
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	OXSR1 Gene (Entity type)	ENSG00000172939 - oxidative stress responsive kinase 1
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	RPS6 Gene (Entity type)	ENSG00000137154 - ribosomal protein S6
	AKR1A1 Gene (Entity type)	ENSG00000117448 - aldo-keto reductase family 1 member A1
	DFFA Gene (Entity type)	ENSG00000160049 - DNA fragmentation factor subunit alpha
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	TRIM24 Gene (Entity type)	ENSG00000122779 - tripartite motif containing 24

EGF

Gene (Entity type)

ENSG00000138798 - epidermal growth factor

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

OXSR1

Gene (Entity type)

ENSG00000172939 - oxidative stress responsive kinase 1

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

RPS6

Gene (Entity type)

ENSG00000137154 - ribosomal protein S6

AKR1A1

Gene (Entity type)

ENSG00000117448 - aldo-keto reductase family 1 member A1

DFFA

Gene (Entity type)

ENSG00000160049 - DNA fragmentation factor subunit alpha

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

TRIM24

Gene (Entity type)

ENSG00000122779 - tripartite motif containing 24

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.