UCN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with UCN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with UCN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with UCN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with UCN Up.

Results found

Linked to

	Label	Description
	FCN3 Gene (Entity type)	ENSG00000142748 - ficolin 3
	COQ9 Gene (Entity type)	ENSG00000088682 - coenzyme Q9
	AMPD1 Gene (Entity type)	ENSG00000116748 - adenosine monophosphate deaminase 1
	MBL2 Gene (Entity type)	ENSG00000165471 - mannose binding lectin 2
	C9 Gene (Entity type)	ENSG00000113600 - complement C9
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	RAPGEF4 Gene (Entity type)	ENSG00000091428 - Rap guanine nucleotide exchange factor 4
	RAF1 Gene (Entity type)	ENSG00000132155 - Raf-1 proto-oncogene, serine/threonine kinase
	ATP2A1 Gene (Entity type)	ENSG00000196296 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
	JTB Gene (Entity type)	ENSG00000143543 - jumping translocation breakpoint

FCN3

Gene (Entity type)

ENSG00000142748 - ficolin 3

COQ9

Gene (Entity type)

ENSG00000088682 - coenzyme Q9

AMPD1

Gene (Entity type)

ENSG00000116748 - adenosine monophosphate deaminase 1

MBL2

Gene (Entity type)

ENSG00000165471 - mannose binding lectin 2

Gene (Entity type)

ENSG00000113600 - complement C9

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

RAPGEF4

Gene (Entity type)

ENSG00000091428 - Rap guanine nucleotide exchange factor 4

RAF1

Gene (Entity type)

ENSG00000132155 - Raf-1 proto-oncogene, serine/threonine kinase

ATP2A1

Gene (Entity type)

ENSG00000196296 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1

JTB

Gene (Entity type)

ENSG00000143543 - jumping translocation breakpoint

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.