GSE185872 methotrexate macrophage 0 v 3 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE185872_methotrexate_macrophage_0_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE185872_methotrexate_macrophage_0_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE185872_methotrexate_macrophage_0_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE185872_methotrexate_macrophage_0_v_3_human_up.

Results found

Linked to

	Label	Description
	HAS2-AS1 Gene (Entity type)	ENSG00000248690 - HAS2 antisense RNA 1
	TPTEP2-CSNK1E Gene (Entity type)	ENSG00000283900 - TPTEP2-CSNK1E readthrough
	LINC01303 Gene (Entity type)	ENSG00000250548 - long intergenic non-protein coding RNA 1303
	STARD13-AS Gene (Entity type)	ENSG00000236581 - STARD13 antisense RNA
	PDCD6IPP1 Gene (Entity type)	ENSG00000275325 - PDCD6IP pseudogene 1
	YBX1P4 Gene (Entity type)	ENSG00000213188 - Y-box binding protein 1 pseudogene 4
	NPM1P23 Gene (Entity type)	ENSG00000242109 - nucleophosmin 1 pseudogene 23
	EBAG9P1 Gene (Entity type)	ENSG00000233690 - EBAG9 pseudogene 1
	IGHEP2 Gene (Entity type)	ENSG00000254017 - immunoglobulin heavy constant epsilon P2 (pseudogene)
	LOC100132078 Gene (Entity type)	ENSG00000255428 - uncharacterized LOC100132078

HAS2-AS1

Gene (Entity type)

ENSG00000248690 - HAS2 antisense RNA 1

TPTEP2-CSNK1E

Gene (Entity type)

ENSG00000283900 - TPTEP2-CSNK1E readthrough

LINC01303

Gene (Entity type)

ENSG00000250548 - long intergenic non-protein coding RNA 1303

STARD13-AS

Gene (Entity type)

ENSG00000236581 - STARD13 antisense RNA

PDCD6IPP1

Gene (Entity type)

ENSG00000275325 - PDCD6IP pseudogene 1

YBX1P4

Gene (Entity type)

ENSG00000213188 - Y-box binding protein 1 pseudogene 4

NPM1P23

Gene (Entity type)

ENSG00000242109 - nucleophosmin 1 pseudogene 23

EBAG9P1

Gene (Entity type)

ENSG00000233690 - EBAG9 pseudogene 1

IGHEP2

Gene (Entity type)

ENSG00000254017 - immunoglobulin heavy constant epsilon P2 (pseudogene)

LOC100132078

Gene (Entity type)

ENSG00000255428 - uncharacterized LOC100132078

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.