AK3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with AK3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with AK3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with AK3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with AK3 Down.

Results found

Linked to

	Label	Description
	BUD31 Gene (Entity type)	ENSG00000106245 - BUD31 spliceosome associated protein
	VPREB1 Gene (Entity type)	ENSG00000169575 - V-set pre-B cell surrogate light chain 1
	ZNF394 Gene (Entity type)	ENSG00000160908 - zinc finger protein 394
	HPS4 Gene (Entity type)	ENSG00000100099 - HPS4 biogenesis of lysosomal organelles complex 3 subunit 2
	MRPL23 Gene (Entity type)	ENSG00000214026 - mitochondrial ribosomal protein L23
	CARS2 Gene (Entity type)	ENSG00000134905 - cysteinyl-tRNA synthetase 2, mitochondrial
	ARPC4 Gene (Entity type)	ENSG00000241553 - actin related protein 2/3 complex subunit 4
	ZNHIT1 Gene (Entity type)	ENSG00000106400 - zinc finger HIT-type containing 1
	POLR2J Gene (Entity type)	ENSG00000005075 - RNA polymerase II subunit J
	NDUFB7 Gene (Entity type)	ENSG00000099795 - NADH:ubiquinone oxidoreductase subunit B7

BUD31

Gene (Entity type)

ENSG00000106245 - BUD31 spliceosome associated protein

VPREB1

Gene (Entity type)

ENSG00000169575 - V-set pre-B cell surrogate light chain 1

ZNF394

Gene (Entity type)

ENSG00000160908 - zinc finger protein 394

HPS4

Gene (Entity type)

ENSG00000100099 - HPS4 biogenesis of lysosomal organelles complex 3 subunit 2

MRPL23

Gene (Entity type)

ENSG00000214026 - mitochondrial ribosomal protein L23

CARS2

Gene (Entity type)

ENSG00000134905 - cysteinyl-tRNA synthetase 2, mitochondrial

ARPC4

Gene (Entity type)

ENSG00000241553 - actin related protein 2/3 complex subunit 4

ZNHIT1

Gene (Entity type)

ENSG00000106400 - zinc finger HIT-type containing 1

POLR2J

Gene (Entity type)

ENSG00000005075 - RNA polymerase II subunit J

NDUFB7

Gene (Entity type)

ENSG00000099795 - NADH:ubiquinone oxidoreductase subunit B7

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.