JCHAIN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with JCHAIN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with JCHAIN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with JCHAIN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with JCHAIN Up.

Results found

Linked to

	Label	Description
	PPP2R5C Gene (Entity type)	ENSG00000078304 - protein phosphatase 2 regulatory subunit B'gamma
	POLD2 Gene (Entity type)	ENSG00000106628 - DNA polymerase delta 2, accessory subunit
	MED24 Gene (Entity type)	ENSG00000008838 - mediator complex subunit 24
	ZDHHC4 Gene (Entity type)	ENSG00000136247 - zDHHC palmitoyltransferase 4
	CCL13 Gene (Entity type)	ENSG00000181374 - C-C motif chemokine ligand 13
	HOXB13 Gene (Entity type)	ENSG00000159184 - homeobox B13
	FBXO28 Gene (Entity type)	ENSG00000143756 - F-box protein 28
	MIA3 Gene (Entity type)	ENSG00000154305 - MIA SH3 domain ER export factor 3
	SUZ12 Gene (Entity type)	ENSG00000178691 - SUZ12 polycomb repressive complex 2 subunit
	SEC23B Gene (Entity type)	ENSG00000101310 - SEC23 homolog B, COPII component

PPP2R5C

Gene (Entity type)

ENSG00000078304 - protein phosphatase 2 regulatory subunit B'gamma

POLD2

Gene (Entity type)

ENSG00000106628 - DNA polymerase delta 2, accessory subunit

MED24

Gene (Entity type)

ENSG00000008838 - mediator complex subunit 24

ZDHHC4

Gene (Entity type)

ENSG00000136247 - zDHHC palmitoyltransferase 4

CCL13

Gene (Entity type)

ENSG00000181374 - C-C motif chemokine ligand 13

HOXB13

Gene (Entity type)

ENSG00000159184 - homeobox B13

FBXO28

Gene (Entity type)

ENSG00000143756 - F-box protein 28

MIA3

Gene (Entity type)

ENSG00000154305 - MIA SH3 domain ER export factor 3

SUZ12

Gene (Entity type)

ENSG00000178691 - SUZ12 polycomb repressive complex 2 subunit

SEC23B

Gene (Entity type)

ENSG00000101310 - SEC23 homolog B, COPII component

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.