ERRFI1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ERRFI1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ERRFI1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ERRFI1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ERRFI1 Up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	RBM8A Gene (Entity type)	ENSG00000265241 - RNA binding motif protein 8A
	EXOSC8 Gene (Entity type)	ENSG00000120699 - exosome component 8
	RPA1 Gene (Entity type)	ENSG00000132383 - replication protein A1
	POLD3 Gene (Entity type)	ENSG00000077514 - DNA polymerase delta 3, accessory subunit
	TRAPPC4 Gene (Entity type)	ENSG00000196655 - trafficking protein particle complex subunit 4
	MDC1 Gene (Entity type)	ENSG00000137337 - mediator of DNA damage checkpoint 1
	ADAMTS3 Gene (Entity type)	ENSG00000156140 - ADAM metallopeptidase with thrombospondin type 1 motif 3
	SF3A3 Gene (Entity type)	ENSG00000183431 - splicing factor 3a subunit 3
	SRRM1 Gene (Entity type)	ENSG00000133226 - serine and arginine repetitive matrix 1

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

RBM8A

Gene (Entity type)

ENSG00000265241 - RNA binding motif protein 8A

EXOSC8

Gene (Entity type)

ENSG00000120699 - exosome component 8

RPA1

Gene (Entity type)

ENSG00000132383 - replication protein A1

POLD3

Gene (Entity type)

ENSG00000077514 - DNA polymerase delta 3, accessory subunit

TRAPPC4

Gene (Entity type)

ENSG00000196655 - trafficking protein particle complex subunit 4

MDC1

Gene (Entity type)

ENSG00000137337 - mediator of DNA damage checkpoint 1

ADAMTS3

Gene (Entity type)

ENSG00000156140 - ADAM metallopeptidase with thrombospondin type 1 motif 3

SF3A3

Gene (Entity type)

ENSG00000183431 - splicing factor 3a subunit 3

SRRM1

Gene (Entity type)

ENSG00000133226 - serine and arginine repetitive matrix 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.