RAB29 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RAB29 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RAB29 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RAB29 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RAB29 Up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	PAFAH1B3 Gene (Entity type)	ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3
	ATP8B4 Gene (Entity type)	ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)
	PRMT2 Gene (Entity type)	ENSG00000160310 - protein arginine methyltransferase 2
	CLIP1 Gene (Entity type)	ENSG00000130779 - CAP-Gly domain containing linker protein 1
	PHC1 Gene (Entity type)	ENSG00000111752 - polyhomeotic homolog 1
	B3GALNT1 Gene (Entity type)	ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)
	CD1D Gene (Entity type)	ENSG00000158473 - CD1d molecule
	GNA14 Gene (Entity type)	ENSG00000156049 - G protein subunit alpha 14
	GTF2H5 Gene (Entity type)	ENSG00000272047 - general transcription factor IIH subunit 5

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

PAFAH1B3

Gene (Entity type)

ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3

ATP8B4

Gene (Entity type)

ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)

PRMT2

Gene (Entity type)

ENSG00000160310 - protein arginine methyltransferase 2

CLIP1

Gene (Entity type)

ENSG00000130779 - CAP-Gly domain containing linker protein 1

PHC1

Gene (Entity type)

ENSG00000111752 - polyhomeotic homolog 1

B3GALNT1

Gene (Entity type)

ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)

CD1D

Gene (Entity type)

ENSG00000158473 - CD1d molecule

GNA14

Gene (Entity type)

ENSG00000156049 - G protein subunit alpha 14

GTF2H5

Gene (Entity type)

ENSG00000272047 - general transcription factor IIH subunit 5

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.