LIPA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LIPA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LIPA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LIPA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LIPA Up.

Results found

Linked to

	Label	Description
	EGLN1 Gene (Entity type)	ENSG00000135766 - egl-9 family hypoxia inducible factor 1
	SLIRP Gene (Entity type)	ENSG00000119705 - SRA stem-loop interacting RNA binding protein
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2
	ZNF43 Gene (Entity type)	ENSG00000198521 - zinc finger protein 43
	IFT25 Gene (Entity type)	ENSG00000081870 - intraflagellar transport 25
	ATP5F1D Gene (Entity type)	ENSG00000099624 - ATP synthase F1 subunit delta
	TMEM185B Gene (Entity type)	ENSG00000226479 - transmembrane protein 185B
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase
	CORO1B Gene (Entity type)	ENSG00000172725 - coronin 1B
	VTN Gene (Entity type)	ENSG00000109072 - vitronectin

EGLN1

Gene (Entity type)

ENSG00000135766 - egl-9 family hypoxia inducible factor 1

SLIRP

Gene (Entity type)

ENSG00000119705 - SRA stem-loop interacting RNA binding protein

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

ZNF43

Gene (Entity type)

ENSG00000198521 - zinc finger protein 43

IFT25

Gene (Entity type)

ENSG00000081870 - intraflagellar transport 25

ATP5F1D

Gene (Entity type)

ENSG00000099624 - ATP synthase F1 subunit delta

TMEM185B

Gene (Entity type)

ENSG00000226479 - transmembrane protein 185B

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

CORO1B

Gene (Entity type)

ENSG00000172725 - coronin 1B

VTN

Gene (Entity type)

ENSG00000109072 - vitronectin

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.