GSE97616 GSE97617 NOK overexpression HEK RNA Small Interfering 5 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_5_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_5_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_5_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_5_v_3_human_dn.

Results found

Linked to

	Label	Description
	H19 Gene (Entity type)	H19 imprinted maternally expressed transcript
	PKD1P1 Gene (Entity type)	polycystin 1, transient receptor potential channel interacting pseudogene 1
	SNHG3 Gene (Entity type)	small nucleolar RNA host gene 3
	TRIM16L Gene (Entity type)	tripartite motif containing 16 like (pseudogene)
	POLR2J3 Gene (Entity type)	RNA polymerase II subunit J3
	LOC389906 Gene (Entity type)	zinc finger protein 839 pseudogene
	SNHG17 Gene (Entity type)	small nucleolar RNA host gene 17
	HMGB1P5 Gene (Entity type)	high mobility group box 1 pseudogene 5
	LINC00707 Gene (Entity type)	long intergenic non-protein coding RNA 707
	ESRG Gene (Entity type)	embryonic stem cell related

H19

Gene (Entity type)

H19 imprinted maternally expressed transcript

PKD1P1

Gene (Entity type)

polycystin 1, transient receptor potential channel interacting pseudogene 1

SNHG3

Gene (Entity type)

small nucleolar RNA host gene 3

TRIM16L

Gene (Entity type)

tripartite motif containing 16 like (pseudogene)

POLR2J3

Gene (Entity type)

RNA polymerase II subunit J3

LOC389906

Gene (Entity type)

zinc finger protein 839 pseudogene

SNHG17

Gene (Entity type)

small nucleolar RNA host gene 17

HMGB1P5

Gene (Entity type)

high mobility group box 1 pseudogene 5

LINC00707

Gene (Entity type)

long intergenic non-protein coding RNA 707

ESRG

Gene (Entity type)

embryonic stem cell related

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.