GSE139261 PDX SOX10 overexpression G144 2 v 4 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139261_PDX_SOX10 overexpression_G144_2_v_4_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139261_PDX_SOX10 overexpression_G144_2_v_4_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139261_PDX_SOX10 overexpression_G144_2_v_4_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139261_PDX_SOX10 overexpression_G144_2_v_4_human_dn.

Results found

Linked to

	Label	Description
	VARS1 Gene (Entity type)	valyl-tRNA synthetase 1
	AKAP17A Gene (Entity type)	A-kinase anchoring protein 17A
	H19 Gene (Entity type)	H19 imprinted maternally expressed transcript
	GOLGA2P7 Gene (Entity type)	GOLGA2 pseudogene 7
	GTPBP6 Gene (Entity type)	GTP binding protein 6
	POU3F3 Gene (Entity type)	POU class 3 homeobox 3
	PPP2R3B Gene (Entity type)	protein phosphatase 2 regulatory subunit B''beta
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	CASTOR3P Gene (Entity type)	CASTOR family member 3, pseudogene
	MRFAP1L2 Gene (Entity type)	Morf4 family associated protein 1 like 2

VARS1

Gene (Entity type)

valyl-tRNA synthetase 1

AKAP17A

Gene (Entity type)

A-kinase anchoring protein 17A

H19

Gene (Entity type)

H19 imprinted maternally expressed transcript

GOLGA2P7

Gene (Entity type)

GOLGA2 pseudogene 7

GTPBP6

Gene (Entity type)

GTP binding protein 6

POU3F3

Gene (Entity type)

POU class 3 homeobox 3

PPP2R3B

Gene (Entity type)

protein phosphatase 2 regulatory subunit B''beta

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

CASTOR3P

Gene (Entity type)

CASTOR family member 3, pseudogene

MRFAP1L2

Gene (Entity type)

Morf4 family associated protein 1 like 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.