VPS13B Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with VPS13B Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with VPS13B Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with VPS13B Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with VPS13B Up.

Results found

Linked to

	Label	Description
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	RAB33A Gene (Entity type)	ENSG00000134594 - RAB33A, member RAS oncogene family
	NR1H3 Gene (Entity type)	ENSG00000025434 - nuclear receptor subfamily 1 group H member 3
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	HOXD11 Gene (Entity type)	ENSG00000128713 - homeobox D11
	TFB2M Gene (Entity type)	ENSG00000162851 - transcription factor B2, mitochondrial
	EPB42 Gene (Entity type)	ENSG00000166947 - erythrocyte membrane protein band 4.2
	E2F5 Gene (Entity type)	ENSG00000133740 - E2F transcription factor 5
	CLEC2D Gene (Entity type)	ENSG00000069493 - C-type lectin domain family 2 member D

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

RAB33A

Gene (Entity type)

ENSG00000134594 - RAB33A, member RAS oncogene family

NR1H3

Gene (Entity type)

ENSG00000025434 - nuclear receptor subfamily 1 group H member 3

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

HOXD11

Gene (Entity type)

ENSG00000128713 - homeobox D11

TFB2M

Gene (Entity type)

ENSG00000162851 - transcription factor B2, mitochondrial

EPB42

Gene (Entity type)

ENSG00000166947 - erythrocyte membrane protein band 4.2

E2F5

Gene (Entity type)

ENSG00000133740 - E2F transcription factor 5

CLEC2D

Gene (Entity type)

ENSG00000069493 - C-type lectin domain family 2 member D

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.