SIK3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SIK3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SIK3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SIK3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SIK3 Up.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	NAA40 Gene (Entity type)	ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit
	TMEM132A Gene (Entity type)	ENSG00000006118 - transmembrane protein 132A
	KIF2A Gene (Entity type)	ENSG00000068796 - kinesin family member 2A
	ATP6V0A4 Gene (Entity type)	ENSG00000105929 - ATPase H+ transporting V0 subunit a4
	GTF2A2 Gene (Entity type)	ENSG00000140307 - general transcription factor IIA subunit 2
	UBXN4 Gene (Entity type)	ENSG00000144224 - UBX domain protein 4
	ENY2 Gene (Entity type)	ENSG00000120533 - ENY2 transcription and export complex 2 subunit
	VGLL1 Gene (Entity type)	ENSG00000102243 - vestigial like family member 1
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

NAA40

Gene (Entity type)

ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit

TMEM132A

Gene (Entity type)

ENSG00000006118 - transmembrane protein 132A

KIF2A

Gene (Entity type)

ENSG00000068796 - kinesin family member 2A

ATP6V0A4

Gene (Entity type)

ENSG00000105929 - ATPase H+ transporting V0 subunit a4

GTF2A2

Gene (Entity type)

ENSG00000140307 - general transcription factor IIA subunit 2

UBXN4

Gene (Entity type)

ENSG00000144224 - UBX domain protein 4

ENY2

Gene (Entity type)

ENSG00000120533 - ENY2 transcription and export complex 2 subunit

VGLL1

Gene (Entity type)

ENSG00000102243 - vestigial like family member 1

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.