CIC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CIC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CIC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CIC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CIC Up.

Results found

Linked to

	Label	Description
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	PSEN1 Gene (Entity type)	ENSG00000080815 - presenilin 1
	NRBF2 Gene (Entity type)	ENSG00000148572 - nuclear receptor binding factor 2
	TNFSF9 Gene (Entity type)	ENSG00000125657 - TNF superfamily member 9
	ARPP21 Gene (Entity type)	ENSG00000172995 - cAMP regulated phosphoprotein 21
	GTF2B Gene (Entity type)	ENSG00000137947 - general transcription factor IIB
	GLRX2 Gene (Entity type)	ENSG00000023572 - glutaredoxin 2
	RND1 Gene (Entity type)	ENSG00000172602 - Rho family GTPase 1
	ZNF267 Gene (Entity type)	ENSG00000185947 - zinc finger protein 267

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

PSEN1

Gene (Entity type)

ENSG00000080815 - presenilin 1

NRBF2

Gene (Entity type)

ENSG00000148572 - nuclear receptor binding factor 2

TNFSF9

Gene (Entity type)

ENSG00000125657 - TNF superfamily member 9

ARPP21

Gene (Entity type)

ENSG00000172995 - cAMP regulated phosphoprotein 21

GTF2B

Gene (Entity type)

ENSG00000137947 - general transcription factor IIB

GLRX2

Gene (Entity type)

ENSG00000023572 - glutaredoxin 2

RND1

Gene (Entity type)

ENSG00000172602 - Rho family GTPase 1

ZNF267

Gene (Entity type)

ENSG00000185947 - zinc finger protein 267

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.