GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 8 v 9 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_8_v_9_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_8_v_9_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_8_v_9_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_8_v_9_human_up.

Results found

Linked to

	Label	Description
	ASMTL Gene (Entity type)	acetylserotonin O-methyltransferase like
	BAIAP2-DT Gene (Entity type)	BAIAP2 divergent transcript
	DUBR Gene (Entity type)	DPPA2 upstream binding RNA
	MRFAP1L2 Gene (Entity type)	Morf4 family associated protein 1 like 2
	HERPUD2-AS1 Gene (Entity type)	HERPUD2 antisense RNA 1
	GIHCG Gene (Entity type)	GIHCG inhibitor of miR-200b/200a/429 expression
	FAM27C Gene (Entity type)	family with sequence similarity 27 member C
	FEZF1-AS1 Gene (Entity type)	FEZF1 antisense RNA 1
	LOC124901321 Gene (Entity type)	uncharacterized LOC124901321
	GAS6-DT Gene (Entity type)	GAS6 divergent transcript

ASMTL

Gene (Entity type)

acetylserotonin O-methyltransferase like

BAIAP2-DT

Gene (Entity type)

BAIAP2 divergent transcript

DUBR

Gene (Entity type)

DPPA2 upstream binding RNA

MRFAP1L2

Gene (Entity type)

Morf4 family associated protein 1 like 2

HERPUD2-AS1

Gene (Entity type)

HERPUD2 antisense RNA 1

GIHCG

Gene (Entity type)

GIHCG inhibitor of miR-200b/200a/429 expression

FAM27C

Gene (Entity type)

family with sequence similarity 27 member C

FEZF1-AS1

Gene (Entity type)

FEZF1 antisense RNA 1

LOC124901321

Gene (Entity type)

uncharacterized LOC124901321

GAS6-DT

Gene (Entity type)

GAS6 divergent transcript

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.