NPEPPS Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NPEPPS Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NPEPPS Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NPEPPS Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NPEPPS Up.

Results found

Linked to

	Label	Description
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	POLD2 Gene (Entity type)	ENSG00000106628 - DNA polymerase delta 2, accessory subunit
	DAZAP1 Gene (Entity type)	ENSG00000071626 - DAZ associated protein 1
	NUP188 Gene (Entity type)	ENSG00000095319 - nucleoporin 188
	TRAPPC4 Gene (Entity type)	ENSG00000196655 - trafficking protein particle complex subunit 4
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	AMBP Gene (Entity type)	ENSG00000106927 - alpha-1-microglobulin/bikunin precursor
	ELP5 Gene (Entity type)	ENSG00000170291 - elongator acetyltransferase complex subunit 5
	PNPLA6 Gene (Entity type)	ENSG00000032444 - patatin like domain 6, lysophospholipase
	VKORC1 Gene (Entity type)	ENSG00000167397 - vitamin K epoxide reductase complex subunit 1

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

POLD2

Gene (Entity type)

ENSG00000106628 - DNA polymerase delta 2, accessory subunit

DAZAP1

Gene (Entity type)

ENSG00000071626 - DAZ associated protein 1

NUP188

Gene (Entity type)

ENSG00000095319 - nucleoporin 188

TRAPPC4

Gene (Entity type)

ENSG00000196655 - trafficking protein particle complex subunit 4

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

AMBP

Gene (Entity type)

ENSG00000106927 - alpha-1-microglobulin/bikunin precursor

ELP5

Gene (Entity type)

ENSG00000170291 - elongator acetyltransferase complex subunit 5

PNPLA6

Gene (Entity type)

ENSG00000032444 - patatin like domain 6, lysophospholipase

VKORC1

Gene (Entity type)

ENSG00000167397 - vitamin K epoxide reductase complex subunit 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.