GSE233140 doxycycline HT [Human HeLa contaminated cell line] 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	SIM2 Gene (Entity type)	ENSG00000159263 - SIM bHLH transcription factor 2
	CRMP1 Gene (Entity type)	ENSG00000072832 - collapsin response mediator protein 1
	UNC13A Gene (Entity type)	ENSG00000130477 - unc-13 homolog A
	SIX3 Gene (Entity type)	ENSG00000138083 - SIX homeobox 3
	COL9A1 Gene (Entity type)	ENSG00000112280 - collagen type IX alpha 1 chain
	GRAPL Gene (Entity type)	ENSG00000189152 - GRB2 related adaptor protein like
	THRSP Gene (Entity type)	ENSG00000151365 - thyroid hormone responsive
	PCDHGC4 Gene (Entity type)	ENSG00000242419 - protocadherin gamma subfamily C, 4
	PRCD Gene (Entity type)	ENSG00000214140 - photoreceptor disc component
	TULP2 Gene (Entity type)	ENSG00000104804 - TUB like protein 2

SIM2

Gene (Entity type)

ENSG00000159263 - SIM bHLH transcription factor 2

CRMP1

Gene (Entity type)

ENSG00000072832 - collapsin response mediator protein 1

UNC13A

Gene (Entity type)

ENSG00000130477 - unc-13 homolog A

SIX3

Gene (Entity type)

ENSG00000138083 - SIX homeobox 3

COL9A1

Gene (Entity type)

ENSG00000112280 - collagen type IX alpha 1 chain

GRAPL

Gene (Entity type)

ENSG00000189152 - GRB2 related adaptor protein like

THRSP

Gene (Entity type)

ENSG00000151365 - thyroid hormone responsive

PCDHGC4

Gene (Entity type)

ENSG00000242419 - protocadherin gamma subfamily C, 4

PRCD

Gene (Entity type)

ENSG00000214140 - photoreceptor disc component

TULP2

Gene (Entity type)

ENSG00000104804 - TUB like protein 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.