GSE233140 doxycycline HT [Human HeLa contaminated cell line] 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	ZNG1DP Gene (Entity type)	Zn regulated GTPase metalloprotein activator 1D, pseudogene
	LINC01123 Gene (Entity type)	long intergenic non-protein coding RNA 1123
	LIF-AS1 Gene (Entity type)	LIF antisense RNA 1
	RB1-DT Gene (Entity type)	RB1 divergent transcript
	LINC00515 Gene (Entity type)	long intergenic non-protein coding RNA 515
	LOC124909475 Gene (Entity type)	uncharacterized LOC124909475
	KRT8P9 Gene (Entity type)	keratin 8 pseudogene 9
	EWSR1P1 Gene (Entity type)	EWSR1 pseudogene 1
	HSPB8-AS1 Gene (Entity type)	HSPB8 antisense RNA 1
	MTATP6P27 Gene (Entity type)	MT-ATP6 pseudogene 27

ZNG1DP

Gene (Entity type)

Zn regulated GTPase metalloprotein activator 1D, pseudogene

LINC01123

Gene (Entity type)

long intergenic non-protein coding RNA 1123

LIF-AS1

Gene (Entity type)

LIF antisense RNA 1

RB1-DT

Gene (Entity type)

RB1 divergent transcript

LINC00515

Gene (Entity type)

long intergenic non-protein coding RNA 515

LOC124909475

Gene (Entity type)

uncharacterized LOC124909475

KRT8P9

Gene (Entity type)

keratin 8 pseudogene 9

EWSR1P1

Gene (Entity type)

EWSR1 pseudogene 1

HSPB8-AS1

Gene (Entity type)

HSPB8 antisense RNA 1

MTATP6P27

Gene (Entity type)

MT-ATP6 pseudogene 27

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.