CALU Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CALU Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CALU Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CALU Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CALU Up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	IL20RA Gene (Entity type)	ENSG00000016402 - interleukin 20 receptor subunit alpha
	ARFIP2 Gene (Entity type)	ENSG00000132254 - ARF interacting protein 2
	JAKMIP2 Gene (Entity type)	ENSG00000176049 - janus kinase and microtubule interacting protein 2
	TRPA1 Gene (Entity type)	ENSG00000104321 - transient receptor potential cation channel subfamily A member 1
	EXOC3 Gene (Entity type)	ENSG00000180104 - exocyst complex component 3
	YTHDF3 Gene (Entity type)	ENSG00000185728 - YTH N6-methyladenosine RNA binding protein F3
	ELAVL4 Gene (Entity type)	ENSG00000162374 - ELAV like RNA binding protein 4
	PCDH8 Gene (Entity type)	ENSG00000136099 - protocadherin 8

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

IL20RA

Gene (Entity type)

ENSG00000016402 - interleukin 20 receptor subunit alpha

ARFIP2

Gene (Entity type)

ENSG00000132254 - ARF interacting protein 2

JAKMIP2

Gene (Entity type)

ENSG00000176049 - janus kinase and microtubule interacting protein 2

TRPA1

Gene (Entity type)

ENSG00000104321 - transient receptor potential cation channel subfamily A member 1

EXOC3

Gene (Entity type)

ENSG00000180104 - exocyst complex component 3

YTHDF3

Gene (Entity type)

ENSG00000185728 - YTH N6-methyladenosine RNA binding protein F3

ELAVL4

Gene (Entity type)

ENSG00000162374 - ELAV like RNA binding protein 4

PCDH8

Gene (Entity type)

ENSG00000136099 - protocadherin 8

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.