GSE238116 EGR1 HCC overexpression MHCC97-H PLC-PRF-5 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	ASMTL Gene (Entity type)	ENSG00000292339 - acetylserotonin O-methyltransferase like
	VARS1 Gene (Entity type)	ENSG00000204394 - valyl-tRNA synthetase 1
	HCP5 Gene (Entity type)	ENSG00000206337 - HLA complex P5
	H3-3A Gene (Entity type)	ENSG00000163041 - H3.3 histone A
	CSF2RA Gene (Entity type)	ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha
	PPP2R3B Gene (Entity type)	ENSG00000292327 - protein phosphatase 2 regulatory subunit B''beta
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	UCA1 Gene (Entity type)	ENSG00000214049 - urothelial cancer associated 1
	TMPO-AS1 Gene (Entity type)	ENSG00000257167 - TMPO antisense RNA 1
	RDM1 Gene (Entity type)	ENSG00000278023 - RAD52 motif containing 1

ASMTL

Gene (Entity type)

ENSG00000292339 - acetylserotonin O-methyltransferase like

VARS1

Gene (Entity type)

ENSG00000204394 - valyl-tRNA synthetase 1

HCP5

Gene (Entity type)

ENSG00000206337 - HLA complex P5

H3-3A

Gene (Entity type)

ENSG00000163041 - H3.3 histone A

CSF2RA

Gene (Entity type)

ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha

PPP2R3B

Gene (Entity type)

ENSG00000292327 - protein phosphatase 2 regulatory subunit B''beta

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

UCA1

Gene (Entity type)

ENSG00000214049 - urothelial cancer associated 1

TMPO-AS1

Gene (Entity type)

ENSG00000257167 - TMPO antisense RNA 1

RDM1

Gene (Entity type)

ENSG00000278023 - RAD52 motif containing 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.