PDXK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PDXK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PDXK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PDXK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PDXK Down.

Results found

Linked to

	Label	Description
	TRAK1 Gene (Entity type)	ENSG00000182606 - trafficking kinesin protein 1
	SRP14 Gene (Entity type)	ENSG00000140319 - signal recognition particle 14
	PRDX6 Gene (Entity type)	ENSG00000117592 - peroxiredoxin 6
	VPREB1 Gene (Entity type)	ENSG00000169575 - V-set pre-B cell surrogate light chain 1
	STX4 Gene (Entity type)	ENSG00000103496 - syntaxin 4
	SPIB Gene (Entity type)	ENSG00000269404 - Spi-B transcription factor
	TMEM43 Gene (Entity type)	ENSG00000170876 - transmembrane protein 43
	CD79B Gene (Entity type)	ENSG00000007312 - CD79b molecule
	ARMC9 Gene (Entity type)	ENSG00000135931 - armadillo repeat containing 9
	GPR18 Gene (Entity type)	ENSG00000125245 - G protein-coupled receptor 18

TRAK1

Gene (Entity type)

ENSG00000182606 - trafficking kinesin protein 1

SRP14

Gene (Entity type)

ENSG00000140319 - signal recognition particle 14

PRDX6

Gene (Entity type)

ENSG00000117592 - peroxiredoxin 6

VPREB1

Gene (Entity type)

ENSG00000169575 - V-set pre-B cell surrogate light chain 1

STX4

Gene (Entity type)

ENSG00000103496 - syntaxin 4

SPIB

Gene (Entity type)

ENSG00000269404 - Spi-B transcription factor

TMEM43

Gene (Entity type)

ENSG00000170876 - transmembrane protein 43

CD79B

Gene (Entity type)

ENSG00000007312 - CD79b molecule

ARMC9

Gene (Entity type)

ENSG00000135931 - armadillo repeat containing 9

GPR18

Gene (Entity type)

ENSG00000125245 - G protein-coupled receptor 18

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.