PDK1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PDK1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PDK1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PDK1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PDK1 Up.

Results found

Linked to

	Label	Description
	CMPK1 Gene (Entity type)	ENSG00000162368 - cytidine/uridine monophosphate kinase 1
	PIGB Gene (Entity type)	ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B
	KCNMB1 Gene (Entity type)	ENSG00000145936 - potassium calcium-activated channel subfamily M regulatory beta subunit 1
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2
	AGA Gene (Entity type)	ENSG00000038002 - aspartylglucosaminidase
	SERPINA6 Gene (Entity type)	ENSG00000170099 - serpin family A member 6
	MRPL40 Gene (Entity type)	ENSG00000185608 - mitochondrial ribosomal protein L40
	IFT25 Gene (Entity type)	ENSG00000081870 - intraflagellar transport 25
	PHC2 Gene (Entity type)	ENSG00000134686 - polyhomeotic homolog 2

CMPK1

Gene (Entity type)

ENSG00000162368 - cytidine/uridine monophosphate kinase 1

PIGB

Gene (Entity type)

ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B

KCNMB1

Gene (Entity type)

ENSG00000145936 - potassium calcium-activated channel subfamily M regulatory beta subunit 1

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

AGA

Gene (Entity type)

ENSG00000038002 - aspartylglucosaminidase

SERPINA6

Gene (Entity type)

ENSG00000170099 - serpin family A member 6

MRPL40

Gene (Entity type)

ENSG00000185608 - mitochondrial ribosomal protein L40

IFT25

Gene (Entity type)

ENSG00000081870 - intraflagellar transport 25

PHC2

Gene (Entity type)

ENSG00000134686 - polyhomeotic homolog 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.