GCAT Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GCAT Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GCAT Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GCAT Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GCAT Up.

Results found

Linked to

	Label	Description
	MRPS18B Gene (Entity type)	ENSG00000204568 - mitochondrial ribosomal protein S18B
	ALG5 Gene (Entity type)	ENSG00000120697 - ALG5 dolichyl-phosphate beta-glucosyltransferase
	MRPS12 Gene (Entity type)	ENSG00000128626 - mitochondrial ribosomal protein S12
	SELENOF Gene (Entity type)	ENSG00000183291 - selenoprotein F
	SCAMP2 Gene (Entity type)	ENSG00000140497 - secretory carrier membrane protein 2
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	METTL5 Gene (Entity type)	ENSG00000138382 - methyltransferase 5, N6-adenosine
	SIVA1 Gene (Entity type)	ENSG00000184990 - SIVA1 apoptosis inducing factor
	TMEM168 Gene (Entity type)	ENSG00000146802 - transmembrane protein 168
	LSM6 Gene (Entity type)	ENSG00000164167 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated

MRPS18B

Gene (Entity type)

ENSG00000204568 - mitochondrial ribosomal protein S18B

ALG5

Gene (Entity type)

ENSG00000120697 - ALG5 dolichyl-phosphate beta-glucosyltransferase

MRPS12

Gene (Entity type)

ENSG00000128626 - mitochondrial ribosomal protein S12

SELENOF

Gene (Entity type)

ENSG00000183291 - selenoprotein F

SCAMP2

Gene (Entity type)

ENSG00000140497 - secretory carrier membrane protein 2

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

METTL5

Gene (Entity type)

ENSG00000138382 - methyltransferase 5, N6-adenosine

SIVA1

Gene (Entity type)

ENSG00000184990 - SIVA1 apoptosis inducing factor

TMEM168

Gene (Entity type)

ENSG00000146802 - transmembrane protein 168

LSM6

Gene (Entity type)

ENSG00000164167 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.