GSE228357 OGA knockdown 2 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE228357_OGA knockdown_2_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE228357_OGA knockdown_2_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE228357_OGA knockdown_2_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE228357_OGA knockdown_2_v_0_human_up.

Results found

Linked to

	Label	Description
	DANCR Gene (Entity type)	differentiation antagonizing non-protein coding RNA
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	OLMALINC Gene (Entity type)	oligodendrocyte maturation-associated long intergenic non-coding RNA
	LINC03040 Gene (Entity type)	long intergenic non-protein coding RNA 3040
	LINC00707 Gene (Entity type)	long intergenic non-protein coding RNA 707
	TMEM198B Gene (Entity type)	transmembrane protein 198B (pseudogene)
	FIRRE Gene (Entity type)	firre intergenic repeating RNA element
	MIAT Gene (Entity type)	myocardial infarction associated transcript
	CNN3-DT Gene (Entity type)	CNN3 divergent transcript
	LOC124903135 Gene (Entity type)	uncharacterized LOC124903135

DANCR

Gene (Entity type)

differentiation antagonizing non-protein coding RNA

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

OLMALINC

Gene (Entity type)

oligodendrocyte maturation-associated long intergenic non-coding RNA

LINC03040

Gene (Entity type)

long intergenic non-protein coding RNA 3040

LINC00707

Gene (Entity type)

long intergenic non-protein coding RNA 707

TMEM198B

Gene (Entity type)

transmembrane protein 198B (pseudogene)

FIRRE

Gene (Entity type)

firre intergenic repeating RNA element

MIAT

Gene (Entity type)

myocardial infarction associated transcript

CNN3-DT

Gene (Entity type)

CNN3 divergent transcript

LOC124903135

Gene (Entity type)

uncharacterized LOC124903135

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.