GSE232944 APC CTNNB1 overexpression HT29 1 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE232944_APC_CTNNB1 overexpression_HT29_1_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE232944_APC_CTNNB1 overexpression_HT29_1_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE232944_APC_CTNNB1 overexpression_HT29_1_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE232944_APC_CTNNB1 overexpression_HT29_1_v_2_human_up.

Results found

Linked to

	Label	Description
	VARS1 Gene (Entity type)	valyl-tRNA synthetase 1
	WDR46 Gene (Entity type)	WD repeat domain 46
	MIR4435-2HG Gene (Entity type)	MIR4435-2 host gene
	LUCAT1 Gene (Entity type)	lung cancer associated transcript 1
	TRIM31 Gene (Entity type)	tripartite motif containing 31
	ABCF2-H2BK1 Gene (Entity type)	ABCF2-H2BK1 readthrough
	AFAP1-AS1 Gene (Entity type)	AFAP1 antisense RNA 1
	LINC00857 Gene (Entity type)	long intergenic non-protein coding RNA 857
	LINC00942 Gene (Entity type)	long intergenic non-protein coding RNA 942
	LINC01559 Gene (Entity type)	long intergenic non-protein coding RNA 1559

VARS1

Gene (Entity type)

valyl-tRNA synthetase 1

WDR46

Gene (Entity type)

WD repeat domain 46

MIR4435-2HG

Gene (Entity type)

MIR4435-2 host gene

LUCAT1

Gene (Entity type)

lung cancer associated transcript 1

TRIM31

Gene (Entity type)

tripartite motif containing 31

ABCF2-H2BK1

Gene (Entity type)

ABCF2-H2BK1 readthrough

AFAP1-AS1

Gene (Entity type)

AFAP1 antisense RNA 1

LINC00857

Gene (Entity type)

long intergenic non-protein coding RNA 857

LINC00942

Gene (Entity type)

long intergenic non-protein coding RNA 942

LINC01559

Gene (Entity type)

long intergenic non-protein coding RNA 1559

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.