GSE85880 GSE85881 tretinoin cardiac muscle cell 4 v 2 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_dn.

Results found

Linked to

	Label	Description
	ARHGAP23 Gene (Entity type)	Rho GTPase activating protein 23
	GPSM3 Gene (Entity type)	G protein signaling modulator 3
	VAMP7 Gene (Entity type)	vesicle associated membrane protein 7
	MIR4435-2HG Gene (Entity type)	MIR4435-2 host gene
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	LINC01291 Gene (Entity type)	long intergenic non-protein coding RNA 1291
	PURPL Gene (Entity type)	p53 upregulated regulator of p53 levels
	LINC00839 Gene (Entity type)	long intergenic non-protein coding RNA 839
	ZNF311 Gene (Entity type)	zinc finger protein 311
	DUSP13A Gene (Entity type)	dual specificity phosphatase 13A

ARHGAP23

Gene (Entity type)

Rho GTPase activating protein 23

GPSM3

Gene (Entity type)

G protein signaling modulator 3

VAMP7

Gene (Entity type)

vesicle associated membrane protein 7

MIR4435-2HG

Gene (Entity type)

MIR4435-2 host gene

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

LINC01291

Gene (Entity type)

long intergenic non-protein coding RNA 1291

PURPL

Gene (Entity type)

p53 upregulated regulator of p53 levels

LINC00839

Gene (Entity type)

long intergenic non-protein coding RNA 839

ZNF311

Gene (Entity type)

zinc finger protein 311

DUSP13A

Gene (Entity type)

dual specificity phosphatase 13A

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.