IPCEF1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with IPCEF1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with IPCEF1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with IPCEF1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with IPCEF1 Up.

Results found

Linked to

	Label	Description
	SLIRP Gene (Entity type)	ENSG00000119705 - SRA stem-loop interacting RNA binding protein
	MRPL42 Gene (Entity type)	ENSG00000198015 - mitochondrial ribosomal protein L42
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	MRPL48 Gene (Entity type)	ENSG00000175581 - mitochondrial ribosomal protein L48
	YAF2 Gene (Entity type)	ENSG00000015153 - YY1 associated factor 2
	RLN1 Gene (Entity type)	ENSG00000107018 - relaxin 1
	CDC123 Gene (Entity type)	ENSG00000151465 - cell division cycle 123
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1
	RLN2 Gene (Entity type)	ENSG00000107014 - relaxin 2

SLIRP

Gene (Entity type)

ENSG00000119705 - SRA stem-loop interacting RNA binding protein

MRPL42

Gene (Entity type)

ENSG00000198015 - mitochondrial ribosomal protein L42

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

MRPL48

Gene (Entity type)

ENSG00000175581 - mitochondrial ribosomal protein L48

YAF2

Gene (Entity type)

ENSG00000015153 - YY1 associated factor 2

RLN1

Gene (Entity type)

ENSG00000107018 - relaxin 1

CDC123

Gene (Entity type)

ENSG00000151465 - cell division cycle 123

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

RLN2

Gene (Entity type)

ENSG00000107014 - relaxin 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.