LNPEP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LNPEP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LNPEP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LNPEP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LNPEP Up.

Results found

Linked to

	Label	Description
	MAD1L1 Gene (Entity type)	ENSG00000002822 - mitotic arrest deficient 1 like 1
	BSCL2 Gene (Entity type)	ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin
	OSBPL2 Gene (Entity type)	ENSG00000130703 - oxysterol binding protein like 2
	ABCA7 Gene (Entity type)	ENSG00000064687 - ATP binding cassette subfamily A member 7
	RPS6KC1 Gene (Entity type)	ENSG00000136643 - ribosomal protein S6 kinase C1
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase
	LRFN4 Gene (Entity type)	ENSG00000173621 - leucine rich repeat and fibronectin type III domain containing 4
	OPLAH Gene (Entity type)	ENSG00000178814 - 5-oxoprolinase, ATP-hydrolysing
	ESF1 Gene (Entity type)	ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein
	DGCR2 Gene (Entity type)	ENSG00000070413 - DiGeorge syndrome critical region gene 2

MAD1L1

Gene (Entity type)

ENSG00000002822 - mitotic arrest deficient 1 like 1

BSCL2

Gene (Entity type)

ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin

OSBPL2

Gene (Entity type)

ENSG00000130703 - oxysterol binding protein like 2

ABCA7

Gene (Entity type)

ENSG00000064687 - ATP binding cassette subfamily A member 7

RPS6KC1

Gene (Entity type)

ENSG00000136643 - ribosomal protein S6 kinase C1

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

LRFN4

Gene (Entity type)

ENSG00000173621 - leucine rich repeat and fibronectin type III domain containing 4

OPLAH

Gene (Entity type)

ENSG00000178814 - 5-oxoprolinase, ATP-hydrolysing

ESF1

Gene (Entity type)

ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein

DGCR2

Gene (Entity type)

ENSG00000070413 - DiGeorge syndrome critical region gene 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.