GNLY Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GNLY Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GNLY Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GNLY Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GNLY Down.

Results found

Linked to

	Label	Description
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	ARHGAP44 Gene (Entity type)	ENSG00000006740 - Rho GTPase activating protein 44
	CRTC3 Gene (Entity type)	ENSG00000140577 - CREB regulated transcription coactivator 3
	PANK2 Gene (Entity type)	ENSG00000125779 - pantothenate kinase 2
	MTMR1 Gene (Entity type)	ENSG00000063601 - myotubularin related protein 1
	VIPR1 Gene (Entity type)	ENSG00000114812 - vasoactive intestinal peptide receptor 1
	SIM2 Gene (Entity type)	ENSG00000159263 - SIM bHLH transcription factor 2
	SEMA4A Gene (Entity type)	ENSG00000196189 - semaphorin 4A
	KCTD9 Gene (Entity type)	ENSG00000104756 - potassium channel tetramerization domain containing 9

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

ARHGAP44

Gene (Entity type)

ENSG00000006740 - Rho GTPase activating protein 44

CRTC3

Gene (Entity type)

ENSG00000140577 - CREB regulated transcription coactivator 3

PANK2

Gene (Entity type)

ENSG00000125779 - pantothenate kinase 2

MTMR1

Gene (Entity type)

ENSG00000063601 - myotubularin related protein 1

VIPR1

Gene (Entity type)

ENSG00000114812 - vasoactive intestinal peptide receptor 1

SIM2

Gene (Entity type)

ENSG00000159263 - SIM bHLH transcription factor 2

SEMA4A

Gene (Entity type)

ENSG00000196189 - semaphorin 4A

KCTD9

Gene (Entity type)

ENSG00000104756 - potassium channel tetramerization domain containing 9

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.