GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_2_human_up.

Results found

Linked to

	Label	Description
	CUTALP Gene (Entity type)	cutA divalent cation tolerance like, pseudogene
	NBPF26 Gene (Entity type)	NBPF member 26
	WFDC21P Gene (Entity type)	WAP four-disulfide core domain 21, pseudogene
	CYP1B1-AS1 Gene (Entity type)	CYP1B1 antisense RNA 1
	ARHGAP27P1-BPTFP1-KPNA2P3 Gene (Entity type)	ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene
	LINC01605 Gene (Entity type)	long intergenic non-protein coding RNA 1605
	ZNF300P1 Gene (Entity type)	zinc finger protein 300 pseudogene 1
	LINC00607 Gene (Entity type)	long intergenic non-protein coding RNA 607
	LNC-LBCS Gene (Entity type)	lncRNA bladder and prostate cancer suppressor, hnRNPK interacting
	ERCC6L2-AS1 Gene (Entity type)	ERCC6L2 antisense RNA 1

CUTALP

Gene (Entity type)

cutA divalent cation tolerance like, pseudogene

NBPF26

Gene (Entity type)

NBPF member 26

WFDC21P

Gene (Entity type)

WAP four-disulfide core domain 21, pseudogene

CYP1B1-AS1

Gene (Entity type)

CYP1B1 antisense RNA 1

ARHGAP27P1-BPTFP1-KPNA2P3

Gene (Entity type)

ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene

LINC01605

Gene (Entity type)

long intergenic non-protein coding RNA 1605

ZNF300P1

Gene (Entity type)

zinc finger protein 300 pseudogene 1

LINC00607

Gene (Entity type)

long intergenic non-protein coding RNA 607

LNC-LBCS

Gene (Entity type)

lncRNA bladder and prostate cancer suppressor, hnRNPK interacting

ERCC6L2-AS1

Gene (Entity type)

ERCC6L2 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.