GSE217776 GSE217829 MLL SGF29 CSNK2A1 knockout U-937 1 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_1_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_1_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_1_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_1_v_3_human_dn.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	ARGLU1 Gene (Entity type)	ENSG00000134884 - arginine and glutamate rich 1
	CSNK2A2 Gene (Entity type)	ENSG00000070770 - casein kinase 2 alpha 2
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	AGL Gene (Entity type)	ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
	GRB2 Gene (Entity type)	ENSG00000177885 - growth factor receptor bound protein 2
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	UBTF Gene (Entity type)	ENSG00000108312 - upstream binding transcription factor

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

ARGLU1

Gene (Entity type)

ENSG00000134884 - arginine and glutamate rich 1

CSNK2A2

Gene (Entity type)

ENSG00000070770 - casein kinase 2 alpha 2

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

AGL

Gene (Entity type)

ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase

GRB2

Gene (Entity type)

ENSG00000177885 - growth factor receptor bound protein 2

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

UBTF

Gene (Entity type)

ENSG00000108312 - upstream binding transcription factor

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.