GSE139540 menadione 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540_menadione_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540_menadione_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540_menadione_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540_menadione_0_v_1_human_up.

Results found

Linked to

	Label	Description
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	DUXAP8 Gene (Entity type)	double homeobox A pseudogene 8
	PPP2R3B Gene (Entity type)	protein phosphatase 2 regulatory subunit B''beta
	SNHG17 Gene (Entity type)	small nucleolar RNA host gene 17
	HAGLR Gene (Entity type)	HOXD antisense growth-associated long non-coding RNA
	LINC-PINT Gene (Entity type)	long intergenic non-protein coding RNA, p53 induced transcript
	MSANTD7 Gene (Entity type)	Myb/SANT DNA binding domain containing 7
	EBLN3P Gene (Entity type)	endogenous Bornavirus like nucleoprotein 3, pseudogene
	CD27-AS1 Gene (Entity type)	CD27 antisense RNA 1
	SLC16A1-AS1 Gene (Entity type)	SLC16A1 antisense RNA 1

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

DUXAP8

Gene (Entity type)

double homeobox A pseudogene 8

PPP2R3B

Gene (Entity type)

protein phosphatase 2 regulatory subunit B''beta

SNHG17

Gene (Entity type)

small nucleolar RNA host gene 17

HAGLR

Gene (Entity type)

HOXD antisense growth-associated long non-coding RNA

LINC-PINT

Gene (Entity type)

long intergenic non-protein coding RNA, p53 induced transcript

MSANTD7

Gene (Entity type)

Myb/SANT DNA binding domain containing 7

EBLN3P

Gene (Entity type)

endogenous Bornavirus like nucleoprotein 3, pseudogene

CD27-AS1

Gene (Entity type)

CD27 antisense RNA 1

SLC16A1-AS1

Gene (Entity type)

SLC16A1 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.