GSE193739 CGA knockdown 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE193739_CGA knockdown_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE193739_CGA knockdown_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE193739_CGA knockdown_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE193739_CGA knockdown_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	DUXAP8 Gene (Entity type)	double homeobox A pseudogene 8
	LINC00662 Gene (Entity type)	long intergenic non-protein coding RNA 662
	MALAT1 Gene (Entity type)	metastasis associated lung adenocarcinoma transcript 1
	C22orf46P Gene (Entity type)	CTA-216E10.6
	FIRRE Gene (Entity type)	firre intergenic repeating RNA element
	SVIL-AS1 Gene (Entity type)	SVIL antisense RNA 1
	ZNF37BP Gene (Entity type)	zinc finger protein 37B, pseudogene
	STARD4-AS1 Gene (Entity type)	STARD4 antisense RNA 1
	MIR663AHG Gene (Entity type)	MIR663A host gene
	CNTNAP3C Gene (Entity type)	contactin associated protein family member 3C

DUXAP8

Gene (Entity type)

double homeobox A pseudogene 8

LINC00662

Gene (Entity type)

long intergenic non-protein coding RNA 662

MALAT1

Gene (Entity type)

metastasis associated lung adenocarcinoma transcript 1

C22orf46P

Gene (Entity type)

CTA-216E10.6

FIRRE

Gene (Entity type)

firre intergenic repeating RNA element

SVIL-AS1

Gene (Entity type)

SVIL antisense RNA 1

ZNF37BP

Gene (Entity type)

zinc finger protein 37B, pseudogene

STARD4-AS1

Gene (Entity type)

STARD4 antisense RNA 1

MIR663AHG

Gene (Entity type)

MIR663A host gene

CNTNAP3C

Gene (Entity type)

contactin associated protein family member 3C

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.